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轉錄調控-DAP-seq

更新時(shí)間:2024-07-02

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轉錄調控-DAP-seq
100+物種,2000+轉錄因子的實(shí)戰經(jīng)驗。
無(wú)需抗體,高通量鑒定轉錄因子的下游基因,藍景科信已助力客戶(hù)在許多期刊發(fā)表文章,例如:Molecular Plant,The Plant Cell,Plant Physiology,Plant Biotechnology Journal,Journal of Integrative Plant Biology,New Phyto
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轉錄調控-DAP-seq

100+物種,2000+轉錄因子的DAP-seq實(shí)戰經(jīng)驗,無(wú)需抗體,高通量鑒定轉錄因子的下游基因,藍景科信已助力客戶(hù)在許多期刊發(fā)表文章,例如:Molecular Plant,The Plant Cell,Plant Physiology,Plant Biotechnology Journal,Journal of Integrative Plant Biology,New Phytologist等。


在功能基因組學(xué)和表觀(guān)遺傳學(xué)研究中,轉錄因子結合位點(diǎn)(TFBS)的發(fā)掘一直是研究熱點(diǎn)。傳統的ChIP-seq(染色質(zhì)免疫共沉淀測序)方法,在抗體質(zhì)量很好的情況下能夠有效檢測到TFBS。然而,好的抗體可遇不可求,這限制了ChIP-seq更廣泛的應用。


DAP-seq技術(shù)的出現,使TFBS 的研究不再局限于物種,不再受抗體質(zhì)量的限制,為生命科學(xué)領(lǐng)域轉錄因子的研究提供了新的有效工具。

已做物種
植物
擬南芥莖瘤芥甘藍型油菜白菜型油菜不結球白菜菜心小麥大麥花生
辣椒番茄草莓黃花棘豆苦蕎紅薯木薯馬鈴薯普通煙草
人參鴨茅ying su甘蔗短芒大麥草二色補血草煙草百脈根芍藥
丹參狗尾草菠菜玉米大豆高粱藜麥陸地棉甜瓜
黃瓜葡萄灰氈毛忍冬粉葛三葉青獼猴桃香蕉蒺藜苜蓿紫花苜蓿
伴礦景天苔蘚地錢(qián)毛果楊717楊84K楊小黑楊胡楊山新楊
小葉楊歐美楊大青楊毛白楊剛毛檉柳白樺光皮樺油松毛竹
麻竹銀杏油桐荔枝柑橘甜橙歐洲云杉核桃柿子
閩楠木荷臍橙板栗杜梨蘋(píng)果
櫻桃麻瘋樹(shù)茶樹(shù)月季海島棉


動(dòng)物
飛蝗新孢子蟲(chóng)





真菌
擬輪枝鐮孢菌豬苓真菌意大利青霉草酸青霉腐霉金黃殼囊孢靈芝糙皮側耳草菇
灰蓋鬼傘蟲(chóng)草亞洲鐮刀菌





細菌
路德維希腸桿菌嗜熱厭氧桿菌生氮假單胞菌伯克赫爾德氏菌布魯氏菌肺炎克雷伯菌





合作案例:


Zhang SL, Wang L, Yao J, Wu N, Ahmad B, Nocker S, Wu JY, Abudureheman R, Li Z, Wang XP. Control of ovule development in Vitis vinifera by VvMADS28 and interacting genes. Horticulture Research. 2023. doi: 10.1093/hr/uhad070. (IF=7.291)


Wang L, Tian T, Liang J, Li R, Xin X, Qi Y, Zhou Y, Fan Q, Ning G, Becana M, Duanmu D. A transcription factor of the NAC family regulates nitrate-induced legume nodule senescence. New Phytol. 2023 Mar 22. doi: 10.1111/nph.18896. (IF=10.323)


Sun Y, Han Y, Sheng K, Yang P, Cao Y, Li H, Zhu QH, Chen J, Zhu S, Zhao T. Single-cell transcriptomic analysis reveals the developmental trajectory and transcriptional regulatory networks of pigment glands in Gossypium bickii. Mol Plant. 2023. doi: 10.1016/j.molp.2023.02.005. (IF=21.949)


Liu Y, Liu Q, Li X, Zhang Z, Ai S, Liu C, Ma F, Li C. MdERF114 enhances the resistance of apple roots to Fusarium solani by regulating the transcription of MdPRX63. Plant Physiol. 2023. doi: 10.1093/plphys/kiad057. (IF=8.005)


Liu YN, Wu FY, Tian RY, Shi YX, Xu ZQ, Liu JY, Huang J, Xue FF, Liu BY, Liu GQ. The bHLH-zip transcription factor SREBP regulates triterpenoid and lipid metabolisms in the medicinal fungus Ganoderma lingzhi. Commun Biol. 2023. doi: 10.1038/s42003-022-04154-6. (IF=6.548)


Liu L, Chen G, Li S, Gu Y, Lu L, Qanmber G, Mendu V, Liu Z, Li F, Yang Z. A brassinosteroid transcriptional regulatory network participates in regulating fiber elongation in cotton. Plant Physiol. 2022. doi: 10.1093/plphys/kiac590. (IF=8.005)


Li M, Hou L, Zhang C, Yang W, Liu X, Zhao H, Pang X, Li Y. Genome-Wide Identification of Direct Targets of ZjVND7 Reveals the Putative Roles of Whole-Genome Duplication in Sour Jujube in Regulating Xylem Vessel Differentiation and Drought Tolerance. Front Plant Sci. 2022 Feb 4;13:829765. doi: 10.3389/fpls.2022.829765. (IF=6.627)


Bi Y, Wang H, Yuan X, Yan Y, Li D, Song F. The NAC transcription factor ONAC083 negatively regulates rice immunity against Magnaporthe oryzae by directly activating transcription of the RING-H2 gene OsRFPH2-6. J Integr Plant Biol. 2022. doi: 10.1111/jipb.13399. (IF=9.106)


Guo X, Yu X, Xu Z, Zhao P, Zou L, Li W, Geng M, Zhang P, Peng M, Ruan M. CC-type glutaredoxin, MeGRXC3, associates with catalases and negatively regulates drought tolerance in cassava (Manihot esculenta Crantz). Plant Biotechnol J. 2022. doi: 10.1111/pbi.13920. (IF=13.263)


Chai Z, Fang J, Huang C, Huang R, Tan X, Chen B, Yao W, Zhang M. A novel transcription factor, ScAIL1, modulates plant defense responses by targeting DELLA and regulating gibberellin and jasmonic acid signaling in sugarcane. J Exp Bot. 2022. 73: 6727-6743. doi: 10.1093/jxb/erac339. (IF=7.298)


Li R, Zheng W, Yang R, Hu Q, Ma L, Zhang H. OsSGT1 promotes melatonin-ameliorated seed tolerance to chromium stress by affecting the OsABI5-OsAPX1 transcriptional module in rice. Plant J. 2022. 112: 151-171. doi: 10.1111/tpj.15937. (IF=5.726)


Li Q, Zhou L, Chen Y, Xiao N, Zhang D, Zhang M, Wang W, Zhang C, Zhang A, Li H, Chen J, Gao Y. Phytochrome interacting factor regulates stomatal aperture by coordinating red light and abscisic acid. Plant Cell. 2022. 34: 4293-4312. doi: 10.1093/plcell/koac244. (IF=12.085)


Luo M, Lu B, Shi Y, Zhao Y, Wei Z, Zhang C, Wang Y, Liu H, Shi Y, Yang J, Song W, Lu X, Fan Y, Xu L, Wang R, Zhao J. A newly characterized allele of ZmR1 increases anthocyanin content in whole maize plant and the regulation mechanism of different ZmR1 alleles. Theor Appl Genet. 2022. 135: 3039-3055. doi: 10.1007/s00122-022-04166-0. (IF=5.574)


Wei H, Xu H, Su C, Wang X, Wang L. Rice CIRCADIAN CLOCK ASSOCIATED 1 transcriptionally regulates ABA signaling to confer multiple abiotic stress tolerance. Plant Physiol. 2022. 190: 1057-1073. doi: 10.1093/plphys/kiac196. (IF=8.005)


Tang N, Cao Z, Yang C, Ran D, Wu P, Gao H, He N, Liu G, Chen Z. A R2R3-MYB transcriptional activator LmMYB15 regulates chlorogenic acid biosynthesis and phenylpropanoid metabolism in Lonicera macranthoides. Plant Sci. 2021. 308: 110924. doi: 10.1016/j.plantsci.2021.110924. (IF=5.363)


Liang S, Gao X, Wang Y, Zhang H, Yin K, Chen S, Zhang M, Zhao R. Phytochrome-interacting factors regulate seedling growth through ABA signaling. Biochem Biophys Res Commun. 2020. 526: 1100-1105. doi: 10.1016/j.bbrc.2020.04.011. (IF=3.322)


Yao J, Shen Z, Zhang Y, Wu X, Wang J, Sa G, Zhang Y, Zhang H, Deng C, Liu J, Hou S, Zhang Y, Zhang Y, Zhao N, Deng S, Lin S, Zhao R, Chen S. Populus euphratica WRKY1 binds the promoter of H+-ATPase gene to enhance gene expression and salt tolerance. J Exp Bot. 2020. 71: 1527-1539. doi: 10.1093/jxb/erz493. (IF=5.36)



相關(guān)服務(wù):

1、 凝膠阻滯實(shí)驗(EMSA):DAP-seq后續驗證服務(wù)。

2、 酵母單雜交:DAP-seq后續驗證服務(wù)

3、 ChIP-seq:高效檢測重組蛋白、轉錄因子在基因組的結合位點(diǎn)

4、 DAP-seq與RNA-seq聯(lián)合分析: 分析轉錄因子的靶基因在RNA-seq數據中的表達變化,深入挖掘DAP-seq和RNA-seq測序數據,增加轉錄組測序的分析深度。

5、 DNA-pull down:鑒定與DNA結合的蛋白。

6、 精美的論文圖片設計與制作:專(zhuān)業(yè)設計師,設計精美論文插圖,提升論文的嚴謹性和美觀(guān)度。

轉錄調控-DAP-seq

DAP-seq是基于DNA親和純化,通過(guò)體外表達轉錄因子鑒定TFBS的技術(shù),具有不受抗體和物種限制,且高通量的優(yōu)勢,自該技術(shù)問(wèn)世以來(lái),已被廣泛應用于轉錄調控和表觀(guān)組學(xué)的研究。能幫助您快速找到轉錄因子的結合位點(diǎn),尋找轉錄因子調控的靶基因。

藍景科信河北生物科技有限公司是一家專(zhuān)業(yè)從事生命科學(xué)產(chǎn)品和技術(shù)開(kāi)發(fā)的公司。本公司擁有雄厚的技術(shù)實(shí)力,創(chuàng )始團隊均具有博士學(xué)位,來(lái)自于國內的清華大學(xué)、中國農業(yè)大學(xué)和美國麻省理工學(xué)院。公司立足保定,放眼中外,以嚴謹的科學(xué)態(tài)度,不斷滿(mǎn)足生命科學(xué)領(lǐng)域的市場(chǎng)需求。







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